Short Bio
After receiving the B.Sc. in Biomedical Engineering at the University of Padova (IT), Massmio moved to the University of Pavia (IT) where he received the M.Sc. degree in Bioengineering and the Ph.D. in Bioengineering and Bioinformatics. From 2014 to May 2020, he worked at the Centre of Health Technologies and at the Electrical, Computer and Biomedical Engineering Department, University of Pavia (IT), focusing his resarch in the field of Synthetic Biology. Between 2017 and 2020 he collaborated as Visiting Researcher at the Department of Mechanical Engineering and at the Center of Synthetic Biology of the Massachusetts Institute of Technology, Cambridge, USA. In 2020, he moved to the University of Padova where - after a senior postocotoral fellow at the Dept. of Information engineering - he is now researcher at the Department of Molecular Medicine. Working in collaboration with the two departments, he started a novel research line in Synthetic Biology, applied to Microbiome Engineering, by adopting Systems biology as bridging discipline between the two scientific fields. In particular, his current research is amed to model complex quorum sensing mechanisms involved in bacterial Antimicrobial Resistance (AMR), and design engineerd bacterial controllers against AMR as novel therapeutics. Broadly speaking, his main research activities are - not limited to - rational design, construction and modeling of synthetic genetic controllers and logics in living cells, CRISPR interference technology, cross-kingdom cell communication and microbiome. He teaches Systems Biology for the Control Systems Engineering Master course, Syntehtic Biology for the Biotechnology Bachelor course and Principles of Syntehtic Biolog for the PhD course in Information Engineering.
Academic Degree
PhD in Bioengineering and Bioinformatics
at the University of Pavia, Italy
Oct 2015 - Jan 2019
Thesis title: Overcoming Metabolic Burden in Synthetic Biology: A CRISPR-interference Approach.
Advisor: Prof. Paolo Magni, Prof. Lorenzo Pasotti
Master's Degree in Bioengineering
at the University of Pavia, Italy
Oct 2012 - Jul 2015
Thesis title: Progettazione bottom-up di sistemi biologici: debug di circuiti genetici interconnessi mediante approcci in-vivo ed in-silico.
Advisor: Prof. Paolo Magni
Bachelor's degree in Biomedical Engineering
at the University of Padova, Italy
Oct 2008 - Jul 2012
Thesis title: Il sistema Bose Electroforce per la caratterizzazione del comportamento a trazione di pericardio bovino e porcino.
Advisor: Prof. Andrea Bagno
Appointments
Fixed Term Researcher - RtdA IBIO/01
at Dept. of Molecular Medicine, University of Padova, Italy
May 2024 - Present
Collaborator
at Dept. of Information Engineering, University of Padova, Italy
Jan 2024 - May 2024
Senior Postdoctoral Researcher
at Dept. of Information Engineering, University of Padova, Italy
Jan 2022 - Dec 2023
Junior Postdoctoral Researcher
at Dept. of Information Engineering, University of Padova, Italy
May 2020 - Dec 2021
Visiting Postdoctoral Researcher
at Del Vecchio Laboratory, Synthetic Biology Centre - SBC
Massachusetts Institute of Technology, USA
Jan 2020 - Feb 2020
Junior Postdoctoral Researcher
at BMS Laboratory (Dept. Industrial and Information Engineering) and Centre for Health Technologies - CHT, University of Pavia, Italy
Oct 2018 - April 2020
Visiting PhD Student
at Del Vecchio Laboratory, Synthetic Biology Centre - SBC
Massachusetts Institute of Technology, USA
Aug 2017 - Mar 2018
Research Interests
Synthetic and Systems Biology as novel interdisciplinary research fields and enabling technologies
- Microbiome Engineering, in particular:
- Quorum sensing mechanisms in bacterial pathogens
- AMR in P.aeruginosa, K.pneumoniaeand A.baumannii
- Tick and vector-born disease-associated microbiota
- Metataxonomics
- Synthetic Biology basic research, in particular:
- Modeling of biological context dependencies
- Genetic feedback controllers
- Quorum sensing and quorum quenching modeling
- Metabolic Burden
- CRISPR-interference technology and control
- Cross-kingdom gene regulation.
Qualitications and Awards
Gold medal and best therapeutics project nominee at the iGEM 2024 Great Jamboree
Nov 2024 - Paris, France
Graduation to Professional Information Engineer Italian legislation
Dec 2015 - Pavia, Italy
"Silvio Cavalcanti Award" for the Best Master Thesis from the National Group of Bioengineering
Sep 2015 - Brixen, Italy
Selected Publications
M Bellato, A Frusteri Chiacchiera, E Salibi, M Casanova, D De Marchi, I Castagliuolo, MG Cusella De Angelis, P Magni, L Pasotti
CRISPR interference modules as low-burden logic inverters in synthetic circuits
Frontiers in Bioengineering and Biotechnology | synthetic biology , 2022
DOI:10.3389/fbioe.2021.743950
HH Huang and M Bellato, Y Qian, P Carrdenas, L Pasotti, P Magni, D Del Vecchio
dCas9 regulator to neutralize competition in CRISPRi cirucits
Nature communications , 2021, 12(1)
DOI:10.1038/s41467-021-21772-6
M Bellato, D De Marchi, C Gualtieri, E Sauta, P Magni, A Macovei, L Pasotti
A Bioinformatics Approach to Explore MicroRNAs as Tools to Bridge Pathways Between Plants and Animals. Is DNA Damage Response (DDR) a Potential Target Process?
Frontiers in plant science , 2019, 10
DOI:10.3389/fpls.2019.01535
L Pasotti, M Bellato, D De Marchi, P Magni
Mechanistic models of inducible synthetic circuits for joint description of DNA copy number, regulatory protein level, and cell load
Processes, 2019, 3(7)
DOI:10.3390/pr7030119
L Pasotti, M Bellato, M Casanova, S Zucca, MG Cusella De Angelis, P Magni
Re-using biological devices: a model-aided analysis of interconnected transcriptional cascades designed from the bottom-up
Journal of Biological Engineering, 2017, 50(11)
DOI:10.1186/s13036-017-0090-3
Check all publication list here
Membership
American Society of Microbiology - Joung International Ambassador since 2023
Founding member of National Group of Bioengineering since 2019
Young Professional Member of the IEEE-EMB group since 2016
Member of the AIChE-SBE since 2018
Member of the ESCMID since 2021
Co-founder of the MIT-Visiting Student Association (ViStA) since 2016
Referee and Editorial activity
Journal referee: IEEE Control Systems Letters, Scientific Reports, MDPI journals (Processes, International Journal of Environmental Research and Public Health, Membranes, Applied Sciences, Material, Modeling, Axioms)
Journal Editor: LNBI, BMC Supplements - Bioinformatics, Frontiers in Systems Biology
Conference organizer: IEEE Conference on Decision and Control (CDC) 2024 - Special Session, Computational Intelligence methods for Bioinformatics & Biostatistics (CIBB) 2023 - Proceedings committee
Conference referee: European Control Conference (ECC) 2022
Oral presentations and invited speaker
Conference oral presentation: "Mathematical model-based prediction of metabolic burden effects in interconnected synthetic gene circuits" at the 3rd International Synthetic and Systems Biology Summer School
Volterra (Pisa), 2016, Italy
Conference oral presentation: "Study of a genetic negative feedback controller via bottom-up approach and mathematical modelling" at Gruppo Nazionale Bioingegneria 2016
Naples, 2016, Italy
Conference oral presentation: "Engineering of a dCas9 feedback regulator to neutralize competition effects in CRISPRi-based genetic circuits" at Bioinformatics and Computational Biology Conference (BBCC) 2020 Meeting
Virtual Conference, 2020
Conference oral presentation: "Novel multi- input logic gates for Synthetic Biology: analysis of the interaction between transcription factors and CRISPR interference" at Bioinformatics and Computational Biology Conference (BBCC) 2021 Meeting
Virtual Conference, 2021
Teaching
- AYs 2023/24 - 20024/25: Teacher in charge
at “Principles of Synthetic Biology” (4 CFU), PhD course in Information Engineering - University of Padova - AYs 2022/23 - 2023/24 - 20024/25: Teacher in charge
at “Synthetic Biology” (2 CFU), first cycle degree course in Biotechnologyies, Biology and Biotechnology - University of Padova - AYs 2021/22 - 2022/23 - 2023/24 - 20024/25: Lecturer
at “Systems Biology” (1 CFU), second cycle degree course in Control Systems Engineering - University of Padova - AYs 2016/17 - 2017/18 - 2018/19: Invited lecturer
“Genome editing and CRISPR technologies” ADE seminar series at Department of Public Health, Experimental and Forensic Medicine - University of Pavia - AY 2016 - 2017: Teaching assistant
"Mathematics for newly-registered in Engineering" course - University of Pavia
Students Supervision
Massimo Bellato has served as:
- Co-supervisor for 1 PhD student in Information Engineering, 1 PhD student in Biology, 2 PhD students in Molecular Medicine at University of Padova;
- Supervisor for 6 BS students in Biomedical Engineering, 2 BS students in Biotechnolgy, 1 BS student in Biology, 1 MS student in Biotechnolgies for Food Science at University of Padova;
- co-supervisor for 2 BS students in Biomedical Engineering, 1 MS student in Medical Biotechnology, 2 MS student in Sanitary Biology, 1 MS student in Pharmacy, 1 MS student in Control Engineering, 1 MS student in Computer Engineering, 2 MS students in Bioengineering at University of Padova;
- co-supervisor for 8 MS students in Bioengineering, 1 MS student in Advanced Biotechnology, 1 MS student in Biology and Genetics, 1 MS student in Medical and Pharmaceutical Biotechnology at University of Pavia;
Last update: 17-October-2024